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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
ATAC-seq
12
total RNA-seq
6
snATAC-seq
4
MeRIP-seq
2
Hi-C
Assay category
40
DNA accessibility
12
Transcription
2
3D chromatin structure
Target of assay
2
control
2
nucleotide modification
Date released
24
May, 2022
18
February, 2023
5
March, 2019
4
January, 2021
4
November, 2020
2
August, 2021
1
October, 2017
Available data
26
fastq
25
bam
18
bed narrowPeak
6
txt
2
bed broadPeak
1
bedpe
1
bedpe bed3+
1
bigWig
1
hic
1
tsv
Organism
58
Homo sapiens
Biosample type
58
tissue
Organ
58
pancreas
Project
36
AMP
22
T1D
Genome assembly (visualization)
22
hg19
3
GRCh38
Lab
AMP-T2D consortium
46
Kyle Gaulton, UCSD
4
Bing Ren, UCSD
4
Rohit N. Kulkarni, M.D., Ph.D.
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
1
Stephen Parker, UMich
lab.title!
AMP-T2D consortium
BIOSAMPLE
ASSAY
58 results
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ATAC-seq
total RNA-seq
snATAC-seq
MeRIP-seq
Hi-C
tissue
islet of Langerhans
34
12
6
4
2
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