Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
167
total RNA-seq
138
ChIP-seq
20
ATAC-seq
3
WGBS
2
DNase-seq
1
Hi-C
1
RRBS
1
pCHi-C
1
single cell RNA-seq
1
small RNA-seq
Assay category
138
DNA binding
Target of assay
60
histone
60
histone modification
42
control
40
narrow histone mark
36
transcription factor
20
broad histone mark
2
chromatin remodeller
1
RNA binding protein
Date released
50
May, 2020
41
August, 2017
38
December, 2017
5
October, 2019
4
November, 2018
Available data
115
bam
76
bed narrowPeak
76
bigWig
70
tagAlign
60
fastq
38
bigBed narrowPeak
3
bed bed3+
Organism
138
Homo sapiens
Biosample type
138
tissue
Organ
138
liver
Project
138
AMP
Genome assembly (visualization)
77
hg19
69
GRCh38
Lab
138
AMP-T2D consortium
Audit category:
27
inconsistent control
Audit category:
1
inconsistent control read length
files.read_length!
33
BIOSAMPLE
ASSAY
138 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
tissue
liver
138
Download