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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
ChIP-seq
3
total RNA-seq
1
DNase-seq
1
RRBS
1
pCHi-C
1
single cell RNA-seq
Assay category
42
DNA binding
4
Transcription
1
DNA accessibility
1
DNA methylation
Target of assay
35
transcription factor
5
histone
5
histone modification
3
broad histone mark
2
chromatin remodeller
2
control
2
narrow histone mark
1
RNA binding protein
Date released
30
December, 2017
6
October, 2019
5
November, 2018
4
August, 2017
2
July, 2019
1
February, 2021
1
March, 2020
Available data
46
bam
44
bigWig
41
bed narrowPeak
39
fastq
34
bigBed narrowPeak
4
bed bed3+
4
tsv
1
bed bedMethyl
1
bed broadPeak
1
bigBed bedMethyl
1
bigBed broadPeak
1
csv
Organism
49
Homo sapiens
Biosample type
49
tissue
Organ
49
liver
Project
49
AMP
Genome assembly (visualization)
46
hg19
45
GRCh38
Lab
49
AMP-T2D consortium
Audit category:
27
inconsistent control
replication_type!
unreplicated
BIOSAMPLE
ASSAY
49 results
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ChIP-seq
total RNA-seq
DNase-seq
RRBS
pCHi-C
single cell RNA-seq
tissue
liver
42
3
1
1
1
1
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