Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ATAC-seq
21
total RNA-seq
16
WGBS
ChIP-seq
12
single cell RNA-seq
1
Hi-C
Assay category
33
Transcription
23
DNA accessibility
16
DNA methylation
1
3D chromatin structure
Date released
29
May, 2022
14
September, 2018
10
February, 2023
9
July, 2018
3
April, 2018
2
August, 2020
2
September, 2017
2
September, 2020
1
August, 2017
1
October, 2022
Available data
43
fastq
32
bigWig
29
bam
29
zippedFastqFolder
22
tsv
7
bed narrowPeak
7
bigBed narrowPeak
1
bedpe bed3+
1
cool
1
hic
Organism
73
Homo sapiens
Biosample type
73
primary cell
Organ
73
epithelium
73
pancreas
Project
44
HPAP
29
AMP
Genome assembly (visualization)
32
GRCh38
30
hg19
Lab
44
Klaus Kaestner, Upenn
29
AMP-T2D consortium
Audit category:
1
audit script error
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
73 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
total RNA-seq
WGBS
single cell RNA-seq
Hi-C
primary cell
pancreatic beta cell
23
21
16
12
1
Download