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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ATAC-seq
21
total RNA-seq
16
WGBS
12
single cell RNA-seq
1
Hi-C
Assay category
33
Transcription
22
DNA accessibility
16
DNA methylation
1
3D chromatin structure
Date released
29
May, 2022
August, 2017
14
September, 2018
10
February, 2023
9
July, 2018
3
April, 2018
2
August, 2020
2
September, 2017
2
September, 2020
1
October, 2022
Available data
42
fastq
31
bigWig
29
zippedFastqFolder
28
bam
22
tsv
6
bed narrowPeak
6
bigBed narrowPeak
1
bedpe bed3+
1
cool
1
hic
Organism
72
Homo sapiens
Biosample type
72
primary cell
Organ
72
epithelium
72
pancreas
Project
44
HPAP
28
AMP
Genome assembly (visualization)
31
GRCh38
29
hg19
Lab
44
Klaus Kaestner, Upenn
28
AMP-T2D consortium
Audit category:
1
audit script error
month_released!
August, 2017
BIOSAMPLE
ASSAY
72 results
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ATAC-seq
total RNA-seq
WGBS
single cell RNA-seq
Hi-C
primary cell
pancreatic beta cell
22
21
16
12
1
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