Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
Hi-C
Assay category
1738
Transcription
1347
DNA binding
793
DNA accessibility
69
DNA methylation
22
3D chromatin structure
Date released
10
March, 2020
July, 2019
4
October, 2019
3
October, 2022
2
August, 2021
1
March, 2019
1
March, 2023
1
November, 2019
Available data
21
hic
18
bedpe bed3+
3
cool
1
bedpe
Organism
22
Homo sapiens
Biosample type
12
tissue
6
primary cell
cell line
4
in vitro differentiated cells
Organ
7
pancreas
5
epithelium
3
blood vessel
3
heart
3
vasculature
2
musculature of body
2
vein
1
kidney
1
liver
Project
18
AMP
3
HPAP
1
ITG
Genome assembly (visualization)
20
hg19
1
GRCh38
Lab
15
AMP-T2D consortium
3
Klaus Kaestner, Upenn
2
Bing Ren, UCSD
1
ITG
1
Katalin Susztak, Upenn
Audit category:
4
audit script error
4
inconsistent ontology term
biosample_type!
cell line
month_released!
July, 2019
BIOSAMPLE
ASSAY
22 results
search-icon
table-tab-icon
Clear Filters
Hi-C
tissue
islet of Langerhans
3
psoas muscle
2
aorta
1
heart
1
heart left ventricle
1
+ See 4 more…
primary cell
endothelial cell of umbilical vein
2
chondrocytes
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
cardiac precursors (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
See all biosamples
Download