Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
Hi-C
Assay category
1357
Transcription
1157
DNA binding
648
DNA accessibility
43
DNA methylation
23
3D chromatin structure
Date released
9
March, 2020
8
July, 2019
4
October, 2019
1
August, 2021
1
March, 2023
Available data
15
hic
12
bedpe bed3+
4
bed bed3+
4
bigWig
4
hdf5
Organism
23
Homo sapiens
Biosample type
12
tissue
7
primary cell
4
in vitro differentiated cells
cell line
Organ
7
epithelium
pancreas
6
musculature of body
5
blood vessel
5
vasculature
4
limb
3
brain
3
heart
2
liver
2
vein
1
connective tissue
1
kidney
Project
22
AMP
1
ITG
Genome assembly (visualization)
18
hg19
1
GRCh38
Lab
21
AMP-T2D consortium
1
ITG
1
Katalin Susztak, Upenn
Audit category:
4
inconsistent ontology term
1
audit script error
biosample_type!
cell line
organ_slims!
pancreas
BIOSAMPLE
ASSAY
23 results
search-icon
table-tab-icon
Clear Filters
Hi-C
tissue
gastrocnemius medialis
4
psoas muscle
2
aorta
1
heart
1
heart left ventricle
1
+ See 3 more…
primary cell
endothelial cell of umbilical vein
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
chondrocytes
1
+ See 1 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
cardiac precursors (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
See all biosamples
Download