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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ATAC-seq
3
DNase-seq
Assay category
179
Transcription
170
DNA binding
25
DNA accessibility
6
DNA methylation
2
3D chromatin structure
Date released
20
May, 2022
November, 2018
2
August, 2017
2
June, 2019
1
October, 2019
Available data
24
bed narrowPeak
23
bigWig
4
bam
3
bigBed narrowPeak
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
1
fastq
Organism
25
Homo sapiens
Biosample type
22
tissue
3
primary cell
cell line
Organ
162
kidney
150
pancreas
103
epithelium
69
heart
50
vasculature
48
blood vessel
44
limb
41
artery
35
brain
35
musculature of body
33
connective tissue
32
eye
25
liver
18
ureter
12
bone element
12
skeleton
10
lung
8
blood
8
bodily fluid
7
adipose tissue
3
nerve
3
vein
1
pituitary gland
1
skin of body
1
spleen
Project
25
AMP
Genome assembly (visualization)
24
hg19
4
GRCh38
Lab
20
Karen Mohlke, UNC
5
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
biosample_type!
cell line
month_released!
November, 2018
BIOSAMPLE
ASSAY
25 results
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ATAC-seq
DNase-seq
tissue
liver
20
right lobe of liver
1
1
primary cell
Liver fetal (hepatocyte)
1
hepatic stellate cell
1
hepatocyte
1
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