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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
370
total RNA-seq
190
ChIP-seq
133
ATAC-seq
74
single cell RNA-seq
51
WGBS
11
snATAC-seq
7
DNase-seq
7
Hi-C
4
MeRIP-seq
2
FAIRE-seq
2
RRBS
2
small RNA-seq
1
pCHi-C
Assay category
7
3D chromatin structure
Date released
3
October, 2022
1
August, 2021
1
March, 2019
1
March, 2020
1
November, 2019
Available data
6
bedpe bed3+
6
hic
3
cool
1
bedpe
Organism
7
Homo sapiens
Biosample type
4
tissue
3
primary cell
cell line
Organ
7
epithelium
7
pancreas
6
musculature of body
5
blood vessel
5
vasculature
4
limb
3
brain
3
heart
2
liver
2
vein
1
connective tissue
1
kidney
Project
4
AMP
3
HPAP
Genome assembly (visualization)
6
hg19
Lab
3
Klaus Kaestner, Upenn
2
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
3
audit script error
biosample_type!
cell line
BIOSAMPLE
ASSAY
7 results
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Hi-C
tissue
islet of Langerhans
3
pancreas
1
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
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