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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
2
Hi-C
1
ATAC-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
total RNA-seq
Assay category
3
Transcription
2
3D chromatin structure
1
DNA accessibility
Date released
2
August, 2021
2
March, 2019
2
March, 2023
Available data
1
bedpe
1
bedpe bed3+
1
hic
1
tsv
Organism
4
Homo sapiens
Biosample type
cell line
4
tissue
2
stem cell
Organ
4
pancreas
Project
4
AMP
2
community
Genome assembly (visualization)
2
hg19
1
GRCh38
Lab
3292
AMP-T2D consortium
338
Kyle Gaulton, UCSD
324
Klaus Kaestner, Upenn
142
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
40
Patrick T. Ellinor, Broad
19
Xin Sun, UCSD
7
Struan F.A. Grant, CHOP
4
Bing Ren, UCSD
4
Rohit N. Kulkarni, M.D., Ph.D.
2
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
biosample_type!
cell line
assembly!
hg18
BIOSAMPLE
ASSAY
6 results
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Hi-C
ATAC-seq
CRISPR RNA-seq
CRISPRi RNA-seq
total RNA-seq
tissue
islet of Langerhans
2
1
1
stem cell
SB Ad3.1
1
1
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