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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
ChIP-seq
17
pCHi-C
7
total RNA-seq
1
DNAme array
Assay category
42
DNA binding
7
Transcription
1
DNA methylation
Target of assay
24
histone
24
histone modification
12
broad histone mark
12
narrow histone mark
12
transcription factor
6
control
5
RNA binding protein
Date released
238
August, 2021
161
May, 2022
154
February, 2023
138
February, 2021
135
August, 2017
87
October, 2019
80
May, 2020
76
November, 2017
67
May, 2021
59
September, 2020
47
September, 2023
31
June, 2019
29
October, 2018
28
March, 2020
25
February, 2020
23
May, 2019
19
April, 2020
17
December, 2017
17
July, 2019
16
January, 2021
15
April, 2019
14
May, 2023
10
November, 2018
10
October, 2017
8
February, 2018
7
August, 2020
5
December, 2019
5
January, 2018
4
December, 2018
4
July, 2018
4
November, 2020
4
September, 2017
3
March, 2023
2
March, 2019
1
August, 2018
1
August, 2022
1
January, 2019
1
September, 2018
Available data
1
bam
1
tagAlign
Organism
67
Homo sapiens
Biosample type
43
in vitro differentiated cells
22
primary cell
cell line
2
tissue
Organ
2
pancreas
1
bone element
1
bone marrow
1
connective tissue
1
epithelium
1
thymus
Project
50
AMP
17
T1D
Genome assembly (visualization)
hg19
271
GRCh38
Lab
60
Kyle Gaulton, UCSD
7
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
biosample_type!
cell line
assembly!
hg19
BIOSAMPLE
ASSAY
67 results
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ChIP-seq
pCHi-C
total RNA-seq
DNAme array
in vitro differentiated cells
embryonic stem cell
37
5
pancreatic PP cell
1
primary cell
monocyte
1
1
1
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
B cell
1
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tissue
pancreas
1
thymus
1
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