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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
203
DNase-seq
53
ChIP-seq
4
ATAC-seq
4
Hi-C
2
Capture-C
2
total RNA-seq
1
pCHi-C
1
snATAC-seq
Assay category
203
DNA accessibility
Date released
187
June, 2019
9
November, 2018
6
October, 2019
1
November, 2020
Available data
207
bam
207
bed narrowPeak
207
bigBed narrowPeak
207
bigWig
205
bed broadPeak
205
bigBed broadPeak
203
bed bed3+
12
fastq
Organism
203
Homo sapiens
Biosample type
176
tissue
27
primary cell
cell line
Organ
78
kidney
36
limb
33
musculature of body
32
brain
30
heart
18
ureter
16
epithelium
11
vasculature
9
blood vessel
8
connective tissue
6
pancreas
5
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
203
AMP
Genome assembly (visualization)
203
GRCh38
180
hg19
Lab
203
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
biosample_type!
cell line
audit.WARNING.category!
inconsistent control run_type
BIOSAMPLE
ASSAY
203 results
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DNase-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 39 more…
primary cell
cardiac fibroblast
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
+ See 17 more…
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