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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
Assay category
9
DNA binding
Target of assay
979
histone modification
978
histone
495
narrow histone mark
482
broad histone mark
260
control
153
transcription factor
49
RNA binding protein
6
chromatin remodeller
3
other context
3
other post-translational modification
2
nucleotide modification
Date released
3
August, 2017
3
December, 2017
3
November, 2018
Available data
9
bam
9
bed narrowPeak
9
bigWig
9
fastq
7
bigBed narrowPeak
1
bed broadPeak
1
bigBed broadPeak
Organism
9
Homo sapiens
Biosample type
cell line
5
tissue
3
in vitro differentiated cells
1
primary cell
Organ
3
liver
3
spleen
2
connective tissue
1
epithelium
Project
9
AMP
Genome assembly (visualization)
9
GRCh38
9
hg19
Lab
9
AMP-T2D consortium
Audit category:
2
inconsistent control
Audit category:
2
inconsistent control read length
biosample_type!
cell line
files.file_type!
bed bedgraph
BIOSAMPLE
ASSAY
9 results
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ChIP-seq
tissue
spleen
3
liver
2
in vitro differentiated cells
adipocyte
2
hepatocyte
1
primary cell
skeletal muscle myoblast
1
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