Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
71
ATAC-seq
Assay category
71
DNA accessibility
Date released
64
August, 2021
4
February, 2021
3
February, 2023
Available data
2810
bam
2647
bigWig
1481
tsv
1413
bed narrowPeak
931
fastq
687
bigBed narrowPeak
378
tagAlign
270
bed bed3+
bed broadPeak
226
bigBed broadPeak
160
txt
153
zippedFastqFolder
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
21
bedpe bed3+
21
hic
11
bed bed3
8
csv
7
bed bedgraph
4
hdf5
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
tar
Organism
71
Homo sapiens
Biosample type
64
tissue
7
in vitro differentiated cells
Organ
64
kidney
4
connective tissue
Project
71
AMP
Genome assembly (visualization)
64
GRCh38
7
hg19
Lab
64
Katalin Susztak, Upenn
4
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
biosample_type!
cell line
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
71 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
tissue
kidney
64
in vitro differentiated cells
adipocyte
4
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
Download