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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ATAC-seq
7
ChIP-seq
4
total RNA-seq
2
single cell RNA-seq
Assay category
37
DNA accessibility
7
DNA binding
6
Transcription
Target of assay
7
control
Date released
35
February, 2023
6
October, 2019
3
July, 2019
2
August, 2021
2
February, 2020
2
May, 2019
Available data
62
bed narrowPeak
36
bam
29
bigWig
bigBed narrowPeak
6
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
50
Homo sapiens
Biosample type
cell line
48
tissue
2
primary cell
Organ
770
pancreas
656
connective tissue
481
adipose tissue
370
epithelium
325
liver
232
kidney
193
heart
159
bone element
159
brain
87
vasculature
85
blood vessel
55
eye
50
artery
49
musculature of body
38
limb
29
embryo
20
lung
17
nerve
16
skeleton
12
spleen
9
vein
8
blood
8
bodily fluid
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
50
AMP
Genome assembly (visualization)
39
GRCh38
4
hg19
Lab
50
AMP-T2D consortium
biosample_type!
cell line
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
50 results
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Clear Filters
ATAC-seq
ChIP-seq
total RNA-seq
single cell RNA-seq
tissue
coronary artery
36
2
1
tibial artery
1
5
1
pulmonary artery
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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