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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
RRBS
16
WGBS
Assay category
34
DNA methylation
Date released
22
July, 2019
6
August, 2017
6
November, 2018
Available data
2803
bam
2641
bigWig
1476
tsv
1380
bed narrowPeak
931
fastq
681
bigBed narrowPeak
378
tagAlign
266
bed bed3+
259
bed broadPeak
222
bigBed broadPeak
160
txt
153
zippedFastqFolder
64
xls
34
bed bedMethyl
34
bigBed bedMethyl
21
bedpe bed3+
21
hic
11
bed bed3
8
csv
7
bed bedgraph
4
hdf5
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
tar
Organism
34
Homo sapiens
Biosample type
25
tissue
9
primary cell
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
3
connective tissue
2
adipose tissue
2
brain
2
liver
2
spleen
2
vasculature
1
blood vessel
eye
1
limb
1
pericardium
Project
34
AMP
Genome assembly (visualization)
18
hg19
16
GRCh38
Lab
34
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
biosample_type!
cell line
organ_slims!
eye
BIOSAMPLE
ASSAY
34 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 11 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 4 more…
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