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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
RRBS
10
WGBS
Assay category
27
DNA methylation
Date released
15
July, 2019
6
August, 2017
6
November, 2018
Available data
2665
bam
2479
bigWig
1365
tsv
1234
bed narrowPeak
931
fastq
593
bigBed narrowPeak
378
tagAlign
240
bed bed3+
233
bed broadPeak
196
bigBed broadPeak
160
txt
153
zippedFastqFolder
64
xls
27
bed bedMethyl
27
bigBed bedMethyl
18
bedpe bed3+
18
hic
11
bed bed3
8
csv
7
bed bedgraph
4
hdf5
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
tar
Organism
27
Homo sapiens
Biosample type
18
tissue
9
primary cell
cell line
Organ
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
3
connective tissue
2
adipose tissue
2
brain
2
liver
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
27
AMP
Genome assembly (visualization)
17
hg19
10
GRCh38
Lab
27
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
biosample_type!
cell line
organ_slims!
heart
BIOSAMPLE
ASSAY
27 results
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RRBS
WGBS
tissue
pancreas
1
2
adipose tissue
2
body of pancreas
2
skeletal muscle tissue
2
spleen
2
+ See 7 more…
primary cell
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
kidney epithelial cell
1
+ See 4 more…
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