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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
371
ChIP-seq
Assay category
371
DNA binding
Target of assay
371
histone
371
histone modification
232
broad histone mark
139
narrow histone mark
77
transcription factor
32
RNA binding protein
4
chromatin remodeller
3
other context
3
other post-translational modification
Date released
92
May, 2019
60
November, 2017
59
April, 2019
52
October, 2019
30
August, 2017
30
October, 2018
19
June, 2019
17
December, 2017
6
January, 2019
6
October, 2017
Available data
797
bigWig
781
bed narrowPeak
750
bam
371
bigBed narrowPeak
310
tagAlign
214
fastq
51
bed broadPeak
25
bed bed3+
16
bigBed broadPeak
1
tagAlign bed3+
Organism
365
Homo sapiens
Biosample type
312
tissue
47
primary cell
cell line
12
in vitro differentiated cells
Organ
91
brain
66
vasculature
65
blood vessel
56
heart
48
limb
43
pancreas
29
epithelium
24
nerve
22
kidney
22
liver
20
artery
14
musculature of body
10
vein
9
connective tissue
6
spleen
1
adipose tissue
1
eye
Project
371
AMP
Genome assembly (visualization)
370
GRCh38
319
hg19
Lab
371
AMP-T2D consortium
Audit category:
17
inconsistent ontology term
Audit category:
3
missing controlled_by
Audit category:
7
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
biosample_type!
cell line
BIOSAMPLE
ASSAY
371 results
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Clear Filters
ChIP-seq
tissue
tibial nerve
24
heart left ventricle
23
kidney
18
tibial artery
18
body of pancreas
17
+ See 25 more…
primary cell
skeletal muscle myoblast
12
endothelial cell of umbilical vein
10
skeletal muscle satellite cell
7
mesenchymal stem cell
6
kidney epithelial cell
3
+ See 8 more…
in vitro differentiated cells
hepatocyte
12
See all biosamples
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