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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ATAC-seq
2
pCHi-C
Assay category
7
DNA accessibility
Date released
4
February, 2021
3
February, 2023
2
March, 2020
Available data
313
bam
300
fastq
185
tsv
171
bigWig
160
txt
153
zippedFastqFolder
146
tagAlign
139
bed narrowPeak
26
bed broadPeak
21
bedpe bed3+
20
hic
19
bed bedMethyl
19
bigBed bedMethyl
14
bed bed3+
12
bigBed narrowPeak
10
bed bed3
8
csv
7
bed bedgraph
4
bigBed broadPeak
4
hdf5
3
cool
2
ibed
1
bedpe
1
tar
Organism
9
Homo sapiens
Biosample type
9
in vitro differentiated cells
Organ
4
connective tissue
Project
9
AMP
Genome assembly (visualization)
9
hg19
Lab
6
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
3
inconsistent ontology term
biosample_type!
cell line
month_released!
January, 2019
assembly!
GRCh38
BIOSAMPLE
ASSAY
9 results
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ATAC-seq
pCHi-C
in vitro differentiated cells
adipocyte
4
Progenitor cell of Hypothalamus (neural progenitor cell)
1
cardiomyocytes (cardiac muscle cell)
1
embryonic stem cell
1
lymphocyte of B lineage (iPSC)
1
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