Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ATAC-seq
21
ChIP-seq
6
single cell RNA-seq
3
total RNA-seq
1
DNase-seq
1
pCHi-C
Assay category
36
DNA accessibility
21
DNA binding
9
Transcription
Target of assay
18
control
3
histone
3
histone modification
2
broad histone mark
1
narrow histone mark
Date released
35
February, 2023
11
May, 2019
10
October, 2019
6
August, 2021
3
February, 2020
July, 2019
1
June, 2019
1
March, 2020
Available data
36
bed narrowPeak
22
bam
10
tsv
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
1
bigWig
Organism
67
Homo sapiens
Biosample type
61
tissue
6
primary cell
cell line
Organ
254
pancreas
218
kidney
195
heart
186
epithelium
121
brain
95
connective tissue
94
liver
89
bone element
67
blood vessel
67
vasculature
65
adipose tissue
46
artery
27
eye
21
limb
20
lung
18
musculature of body
12
nerve
11
spleen
8
blood
8
bodily fluid
8
embryo
5
gonad
5
ovary
5
vein
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
67
AMP
Genome assembly (visualization)
115
GRCh38
hg19
Lab
67
AMP-T2D consortium
biosample_type!
cell line
month_released!
July, 2019
assembly!
hg19
BIOSAMPLE
ASSAY
67 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
ChIP-seq
single cell RNA-seq
total RNA-seq
DNase-seq
pCHi-C
tissue
coronary artery
35
2
1
aorta
2
4
1
tibial artery
5
1
ascending aorta
3
1
thoracic aorta
4
+ See 1 more…
primary cell
endothelial cell of umbilical vein
5
kidney capillary endothelial cell
1
See all biosamples
Download