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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1016
ChIP-seq
920
total RNA-seq
458
ATAC-seq
359
single cell RNA-seq
193
DNase-seq
86
RNA microarray
84
snATAC-seq
68
WGBS
42
pCHi-C
25
Hi-C
20
RRBS
15
small RNA-seq
5
GRO-seq
4
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
DNAme array
Assay category
193
DNA accessibility
Date released
181
June, 2019
8
November, 2018
October, 2019
4
August, 2017
Available data
192
bam
192
bed narrowPeak
192
bigBed narrowPeak
192
bigWig
190
bed broadPeak
190
bigBed broadPeak
189
bed bed3+
10
fastq
Organism
193
Homo sapiens
Biosample type
172
tissue
21
primary cell
Organ
78
kidney
33
musculature of body
32
brain
32
limb
30
heart
18
ureter
14
epithelium
connective tissue
7
pancreas
7
vasculature
6
liver
5
blood vessel
4
eye
2
adipose tissue
2
artery
1
spleen
Project
193
AMP
Genome assembly (visualization)
190
GRCh38
170
hg19
Lab
193
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
biosample_type!
cell line
month_released!
October, 2019
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
193 results
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DNase-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 37 more…
primary cell
glomerular visceral epithelial cell
2
kidney tubule cell
2
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
+ See 13 more…
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