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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
62
total RNA-seq
12
ATAC-seq
2
pCHi-C
Assay category
62
Transcription
12
DNA accessibility
Date released
150
February, 2021
8
February, 2023
1
March, 2020
1
May, 2021
Available data
88
txt
66
bam
59
tsv
58
bigWig
8
bed narrowPeak
4
bed bed3
Organism
160
Homo sapiens
Biosample type
159
tissue
1
primary cell
Organ
851
pancreas
680
connective tissue
490
adipose tissue
412
epithelium
383
liver
320
kidney
319
heart
200
brain
159
bone element
123
vasculature
117
blood vessel
96
musculature of body
53
limb
49
artery
40
eye
29
embryo
25
spleen
20
lung
18
ureter
16
skeleton
8
blood
8
bodily fluid
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
nerve
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
1
vein
Project
159
AMP
1
T1D
Genome assembly (visualization)
70
hg19
66
GRCh38
Lab
159
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
biosample_type!
cell line
month_released!
October, 2019
BIOSAMPLE
ASSAY
160 results
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RNA microarray
total RNA-seq
ATAC-seq
pCHi-C
tissue
bone element
84
bone tissue
58
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
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primary cell
megakaryocyte
1
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