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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
ChIP-seq
2
total RNA-seq
Assay category
51
DNA binding
2
Transcription
Target of assay
50
control
1
histone
1
histone modification
1
narrow histone mark
Date released
610
February, 2021
313
May, 2020
269
August, 2017
246
May, 2021
183
August, 2021
168
July, 2018
162
May, 2022
134
February, 2023
110
October, 2019
101
July, 2019
59
September, 2020
51
March, 2020
49
April, 2018
47
September, 2023
31
October, 2018
27
November, 2017
27
September, 2018
25
February, 2020
23
February, 2018
23
May, 2019
22
December, 2017
20
November, 2019
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
11
October, 2017
10
December, 2019
10
November, 2018
8
June, 2019
8
November, 2020
7
August, 2020
7
January, 2018
6
September, 2017
5
March, 2019
4
August, 2018
4
December, 2018
3
June, 2018
3
March, 2023
3
October, 2022
1
August, 2022
1
January, 2019
Available data
170
bam
154
fastq
119
bigWig
bed narrowPeak
95
bigBed narrowPeak
15
bed bed3+
2
tsv
Organism
53
Homo sapiens
Biosample type
41
tissue
9
in vitro differentiated cells
2
primary cell
1
stem cell
Organ
18
adipose tissue
18
connective tissue
13
liver
13
pancreas
5
embryo
5
epithelium
Project
53
AMP
Genome assembly (visualization)
7
GRCh38
7
hg19
Lab
53
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
biosample_type!
cell line
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
53 results
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Clear Filters
ChIP-seq
total RNA-seq
tissue
subcutaneous adipose tissue
10
liver
9
body of pancreas
8
omental fat pad
8
right lobe of liver
3
+ See 2 more…
in vitro differentiated cells
pancreatic endoderm
3
Hepatic endoderm
2
Posterior foregut
1
definitive endodermal cell
1
hepatocyte
1
+ See 1 more…
primary cell
pancreatic acinar cell
2
stem cell
hESC
1
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