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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
27
snATAC-seq
single cell RNA-seq
6
WGBS
4
ATAC-seq
3
snDrop-seq
1
pCHi-C
Assay category
31
DNA accessibility
6
DNA methylation
Date released
166
May, 2022
163
February, 2023
162
August, 2017
133
May, 2020
125
February, 2021
107
May, 2021
97
October, 2019
72
August, 2021
42
March, 2020
29
July, 2019
29
October, 2018
28
November, 2017
25
February, 2020
24
May, 2019
17
December, 2017
16
April, 2019
16
January, 2021
16
September, 2020
10
April, 2020
9
October, 2017
8
February, 2018
8
June, 2019
7
January, 2018
4
December, 2018
4
July, 2018
4
November, 2018
4
November, 2020
4
September, 2017
3
March, 2019
3
October, 2022
2
December, 2019
2
March, 2023
1
August, 2018
1
August, 2022
1
January, 2019
1
November, 2019
Available data
84
txt
33
fastq
9
tsv
4
bed bedgraph
1
bam
1
bed bed3+
Organism
125
Homo sapiens
Biosample type
87
tissue
34
primary cell
cell line
4
in vitro differentiated cells
Organ
84
bone element
6
epithelium
6
pancreas
5
connective tissue
3
kidney
Project
92
AMP
33
HPAP
Genome assembly (visualization)
481
hg19
GRCh38
Lab
92
AMP-T2D consortium
33
Klaus Kaestner, Upenn
Audit category:
84
inconsistent ontology term
27
audit script error
biosample_type!
cell line
assay_title!
single cell RNA-seq
assembly!
GRCh38
BIOSAMPLE
ASSAY
125 results
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Clear Filters
RNA microarray
snATAC-seq
WGBS
ATAC-seq
snDrop-seq
pCHi-C
tissue
bone element
84
kidney (Cortex-Medulla)
1
kidney (cortex)
1
kidney (medulla)
1
primary cell
Langerhans cell
27
pancreatic alpha cell
6
osteoblast
1
in vitro differentiated cells
adipocyte
4
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