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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
467
total RNA-seq
27
snATAC-seq
12
single cell RNA-seq
9
ATAC-seq
6
WGBS
1
pCHi-C
Assay category
479
Transcription
36
DNA accessibility
6
DNA methylation
Date released
522
February, 2021
288
August, 2017
283
May, 2020
272
May, 2021
221
October, 2019
218
June, 2019
164
July, 2018
120
May, 2019
94
December, 2017
82
July, 2019
79
April, 2019
78
November, 2017
76
February, 2023
76
October, 2018
73
September, 2018
49
April, 2018
44
November, 2019
41
August, 2021
41
September, 2020
39
February, 2018
27
November, 2018
24
May, 2022
17
October, 2017
11
March, 2020
11
September, 2017
7
August, 2020
7
December, 2018
7
January, 2019
6
November, 2020
5
December, 2019
5
January, 2018
4
August, 2018
3
June, 2018
1
March, 2019
Available data
481
tsv
477
bam
468
bigWig
89
txt
45
fastq
9
bed narrowPeak
6
csv
4
bed bedgraph
1
bed bed3
1
bed bed3+
Organism
522
Homo sapiens
Biosample type
452
tissue
cell line
48
primary cell
22
in vitro differentiated cells
Organ
451
connective tissue
386
adipose tissue
66
bone element
8
skeleton
6
epithelium
6
limb
6
pancreas
Project
477
AMP
45
HPAP
Genome assembly (visualization)
477
hg19
476
GRCh38
Lab
477
AMP-T2D consortium
45
Klaus Kaestner, Upenn
Audit category:
27
audit script error
18
inconsistent ontology term
biosample_type!
cell line
BIOSAMPLE
ASSAY
522 results
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Clear Filters
total RNA-seq
snATAC-seq
single cell RNA-seq
ATAC-seq
WGBS
pCHi-C
tissue
adipose tissue
381
bone tissue
58
visceral abdominal adipose tissue
3
subcutaneous adipose tissue
2
distal epiphysis
1
+ See 7 more…
primary cell
Langerhans cell
27
12
pancreatic alpha cell
6
osteoblast
1
1
1
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
18
adipocyte
4
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