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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ATAC-seq
19
total RNA-seq
1
Hi-C
Assay category
32
DNA accessibility
19
Transcription
1
3D chromatin structure
Date released
619
February, 2021
411
August, 2017
378
May, 2021
340
May, 2020
284
October, 2019
275
August, 2021
218
June, 2019
200
May, 2022
199
February, 2023
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
91
November, 2017
80
April, 2019
76
October, 2018
73
September, 2018
59
September, 2020
53
March, 2020
49
April, 2018
47
September, 2023
45
November, 2019
39
February, 2018
27
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
September, 2017
10
December, 2019
10
November, 2020
7
August, 2020
7
December, 2018
7
January, 2018
7
January, 2019
5
March, 2019
4
August, 2018
3
June, 2018
3
March, 2023
3
October, 2022
1
August, 2022
Available data
44
bam
26
bigWig
25
bed narrowPeak
19
tsv
7
fastq
1
bedpe bed3+
1
hic
Organism
52
Homo sapiens
Biosample type
40
tissue
cell line
7
primary cell
5
in vitro differentiated cells
Organ
46
pancreas
7
epithelium
1
adipose tissue
1
connective tissue
Project
45
AMP
7
HPAP
Genome assembly (visualization)
51
GRCh38
45
hg19
Lab
45
AMP-T2D consortium
7
Klaus Kaestner, Upenn
Audit category:
6
inconsistent ontology term
biosample_type!
cell line
BIOSAMPLE
ASSAY
52 results
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Clear Filters
ATAC-seq
total RNA-seq
Hi-C
tissue
islet of Langerhans
19
19
1
adipose tissue(adipose white tissue)
1
primary cell
pancreatic alpha cell
5
pancreatic beta cell
2
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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