Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
10
DNase-seq
6
WGBS
4
MeRIP-seq
4
total RNA-seq
1
ATAC-seq
1
FAIRE-seq
1
single cell RNA-seq
Assay category
12
DNA accessibility
10
DNA binding
6
DNA methylation
5
Transcription
Target of assay
7
transcription factor
5
control
3
other context
3
other post-translational modification
2
nucleotide modification
Date released
619
February, 2021
411
August, 2017
378
May, 2021
340
May, 2020
284
October, 2019
275
August, 2021
218
June, 2019
200
May, 2022
199
February, 2023
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
91
November, 2017
80
April, 2019
76
October, 2018
73
September, 2018
59
September, 2020
53
March, 2020
49
April, 2018
47
September, 2023
45
November, 2019
39
February, 2018
27
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
September, 2017
10
December, 2019
10
November, 2020
7
August, 2020
7
December, 2018
7
January, 2018
7
January, 2019
5
March, 2019
4
August, 2018
3
June, 2018
3
March, 2023
3
October, 2022
1
August, 2022
Available data
32
bam
28
bigWig
27
fastq
19
bed narrowPeak
18
bigBed narrowPeak
10
bed bed3+
10
bed broadPeak
10
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
4
tsv
1
csv
Organism
37
Homo sapiens
Biosample type
cell line
30
tissue
7
primary cell
Organ
11
pancreas
9
spleen
7
connective tissue
7
liver
2
brain
1
adipose tissue
Project
37
AMP
Genome assembly (visualization)
28
GRCh38
23
hg19
Lab
33
AMP-T2D consortium
4
Rohit N. Kulkarni, M.D., Ph.D.
biosample_type!
cell line
BIOSAMPLE
ASSAY
37 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
WGBS
MeRIP-seq
total RNA-seq
ATAC-seq
FAIRE-seq
single cell RNA-seq
tissue
spleen
6
1
2
liver
4
2
body of pancreas
2
2
islet of Langerhans
4
pancreas
2
1
+ See 3 more…
primary cell
osteoblast
1
4
1
pancreatic cell
1
See all biosamples
Download