Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
Hi-C
2
pCHi-C
Assay category
12
3D chromatin structure
Date released
11
March, 2020
3
October, 2019
Available data
1742
bam
1655
bigWig
1207
bed narrowPeak
697
tsv
593
bigBed narrowPeak
416
fastq
351
tagAlign
240
bed broadPeak
237
bed bed3+
218
bigBed broadPeak
154
txt
73
zippedFastqFolder
64
xls
27
bed bedMethyl
27
bigBed bedMethyl
15
hic
14
bedpe bed3+
11
bed bed3
8
csv
7
bed bedgraph
4
hdf5
2
ibed
1
tagAlign bed3+
1
tar
Organism
14
Homo sapiens
Biosample type
7
tissue
6
in vitro differentiated cells
cell line
1
primary cell
Organ
pancreas
4
epithelium
3
heart
2
blood vessel
2
musculature of body
2
vasculature
adipose tissue
1
connective tissue
1
liver
1
vein
Project
14
AMP
Genome assembly (visualization)
14
hg19
Lab
14
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
biosample_type!
cell line
organ_slims!
adipose tissue
pancreas
BIOSAMPLE
ASSAY
14 results
search-icon
table-tab-icon
Clear Filters
Hi-C
pCHi-C
tissue
psoas muscle
2
aorta
1
heart
1
heart left ventricle
1
heart right ventricle
1
+ See 1 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
1
lymphocyte of B lineage (iPSC)
1
1
cardiac precursors (cardiac muscle cell)
1
primary cell
endothelial cell of umbilical vein
1
See all biosamples
Download