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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1194
ChIP-seq
946
total RNA-seq
477
ATAC-seq
359
single cell RNA-seq
201
DNase-seq
86
RNA microarray
84
snATAC-seq
68
WGBS
46
pCHi-C
29
Hi-C
20
RRBS
15
small RNA-seq
5
FAIRE-seq
5
GRO-seq
4
MeRIP-seq
3
snDrop-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
DNAme array
Assay category
68
DNA methylation
Date released
41
May, 2022
12
July, 2019
6
February, 2021
6
November, 2018
3
August, 2017
Available data
41
zippedFastqFolder
15
bam
14
bed bedMethyl
14
bigBed bedMethyl
14
bigWig
13
fastq
6
tsv
Organism
68
Homo sapiens
Biosample type
47
primary cell
21
tissue
cell line
Organ
51
pancreas
47
epithelium
8
heart
6
adipose tissue
connective tissue
4
liver
2
blood vessel
2
spleen
2
vasculature
1
limb
1
musculature of body
Project
47
HPAP
21
AMP
Genome assembly (visualization)
14
GRCh38
Lab
47
Klaus Kaestner, Upenn
21
AMP-T2D consortium
biosample_type!
cell line
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
68 results
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WGBS
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
tissue
heart left ventricle
4
liver
3
aorta
2
body of pancreas
2
heart right ventricle
2
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