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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ATAC-seq
28
ChIP-seq
4
DNase-seq
2
single cell RNA-seq
2
total RNA-seq
Assay category
41
DNA accessibility
28
DNA binding
4
Transcription
Target of assay
20
histone
20
histone modification
14
broad histone mark
7
control
6
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
35
February, 2023
26
October, 2019
5
May, 2019
3
July, 2019
2
August, 2021
February, 2020
2
June, 2019
Available data
62
bed narrowPeak
36
bam
29
bigWig
25
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
tsv
Organism
73
Homo sapiens
Biosample type
71
tissue
cell line
2
primary cell
Organ
853
pancreas
682
connective tissue
489
adipose tissue
445
epithelium
389
liver
335
kidney
324
heart
274
brain
167
vasculature
161
blood vessel
159
bone element
119
limb
94
musculature of body
73
artery
60
eye
42
nerve
29
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
8
blood
8
bodily fluid
5
gonad
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
73
AMP
Genome assembly (visualization)
64
GRCh38
29
hg19
Lab
73
AMP-T2D consortium
biosample_type!
cell line
organ_slims!
ovary
month_released!
February, 2020
BIOSAMPLE
ASSAY
73 results
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ATAC-seq
ChIP-seq
DNase-seq
single cell RNA-seq
total RNA-seq
tissue
coronary artery
36
5
2
tibial artery
1
23
2
pulmonary artery
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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