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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
RRBS
12
WGBS
8
Hi-C
6
ATAC-seq
2
FAIRE-seq
Assay category
27
DNA methylation
8
3D chromatin structure
8
DNA accessibility
Date released
322
August, 2017
271
October, 2019
218
June, 2019
209
May, 2021
200
May, 2022
183
February, 2023
169
August, 2021
152
May, 2020
138
February, 2021
120
May, 2019
94
December, 2017
91
November, 2017
80
April, 2019
74
October, 2018
59
September, 2020
47
September, 2018
47
September, 2023
43
July, 2019
40
May, 2024
27
November, 2018
26
November, 2019
24
February, 2018
23
October, 2017
19
April, 2020
17
March, 2020
16
January, 2021
15
May, 2023
11
September, 2017
7
August, 2020
7
December, 2018
7
January, 2018
7
January, 2019
6
November, 2020
5
March, 2019
4
July, 2018
3
March, 2023
3
October, 2022
1
August, 2018
1
August, 2022
1
December, 2019
Available data
85
bigWig
82
bam
tsv
23
bed bedMethyl
23
bigBed bedMethyl
7
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
43
Homo sapiens
Biosample type
30
tissue
13
primary cell
Organ
14
heart
8
epithelium
7
brain
7
vasculature
6
blood vessel
6
musculature of body
5
kidney
5
limb
3
liver
2
connective tissue
2
pancreas
1
artery
1
eye
1
pericardium
Project
43
AMP
Genome assembly (visualization)
26
hg19
14
GRCh38
Lab
43
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
biosample_type!
cell line
organ_slims!
skin of body
files.file_type!
tsv
BIOSAMPLE
ASSAY
43 results
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Clear Filters
RRBS
WGBS
Hi-C
ATAC-seq
FAIRE-seq
tissue
heart left ventricle
1
4
2
gastrocnemius medialis
4
aorta
2
heart right ventricle
2
kidney
1
1
+ See 13 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
cardiac fibroblast
1
cardiac muscle cell
1
+ See 8 more…
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