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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
Assay category
4
3D chromatin structure
Date released
10
March, 2020
4
October, 2019
3
October, 2022
1
August, 2021
1
March, 2019
1
March, 2023
1
November, 2019
Available data
221
bam
187
bigWig
174
bed narrowPeak
62
bigBed narrowPeak
49
tagAlign
12
tsv
8
bed broadPeak
8
bigBed broadPeak
6
bed bed3+
4
hic
3
bedpe bed3+
1
tagAlign bed3+
1
tar
Organism
4
Homo sapiens
Biosample type
2
in vitro differentiated cells
1
primary cell
1
tissue
Organ
1
blood vessel
1
epithelium
1
heart
1
vasculature
1
vein
Project
4
AMP
Genome assembly (visualization)
4
hg19
Lab
4
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
1
audit script error
biosample_type!
cell line
organ_slims!
ureter
BIOSAMPLE
ASSAY
4 results
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Hi-C
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
primary cell
endothelial cell of umbilical vein
1
tissue
heart
1
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