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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
RRBS
15
WGBS
Assay category
33
DNA methylation
Date released
21
July, 2019
6
August, 2017
6
November, 2018
Available data
2691
bam
2508
bigWig
1465
tsv
1252
bed narrowPeak
925
fastq
604
bigBed narrowPeak
378
tagAlign
257
bed bed3+
246
bed broadPeak
209
bigBed broadPeak
160
txt
153
zippedFastqFolder
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
19
bedpe bed3+
18
hic
11
bed bed3
8
csv
7
bed bedgraph
3
cool
2
hdf5
2
ibed
1
bedpe
1
tagAlign bed3+
Organism
33
Homo sapiens
Biosample type
24
tissue
9
primary cell
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
3
connective tissue
2
adipose tissue
2
brain
2
liver
2
spleen
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
33
AMP
Genome assembly (visualization)
18
hg19
15
GRCh38
Lab
33
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
biosample_type!
cell line
organ_slims!
vasculature
BIOSAMPLE
ASSAY
33 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 10 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
kidney epithelial cell
1
+ See 4 more…
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