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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
DNase-seq
8
snATAC-seq
4
ATAC-seq
1
FAIRE-seq
Assay category
218
DNA binding
45
DNA accessibility
24
Transcription
3
3D chromatin structure
2
DNA methylation
Date released
30
June, 2019
8
January, 2021
2
July, 2019
2
November, 2018
1
February, 2023
1
October, 2017
1
October, 2019
Available data
35
bam
35
bigWig
33
bed narrowPeak
33
bigBed narrowPeak
32
bed bed3+
32
bed broadPeak
32
bigBed broadPeak
3
fastq
1
bed bed3
Organism
45
Homo sapiens
Biosample type
32
tissue
13
primary cell
cell line
Organ
162
kidney
153
pancreas
103
epithelium
69
heart
50
vasculature
48
blood vessel
44
limb
41
artery
37
brain
35
musculature of body
34
connective tissue
32
eye
28
liver
18
ureter
12
bone element
12
skeleton
10
lung
8
adipose tissue
8
blood
8
bodily fluid
3
nerve
3
vein
2
spleen
1
pituitary gland
1
skin of body
Project
37
AMP
8
T1D
Genome assembly (visualization)
34
GRCh38
24
hg19
Lab
37
AMP-T2D consortium
8
Kyle Gaulton, UCSD
biosample_type!
cell line
BIOSAMPLE
ASSAY
45 results
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DNase-seq
snATAC-seq
ATAC-seq
FAIRE-seq
tissue
brain
14
1
frontal cortex
2
1
cerebellum (Hemisphere)
1
1
Ammon's horn
1
caudate nucleus
1
+ See 10 more…
primary cell
peripheral blood mononuclear cell
8
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
brain pericyte
1
+ See 1 more…
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