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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
97
total RNA-seq
70
single cell RNA-seq
Assay category
167
Transcription
114
DNA binding
103
DNA accessibility
53
DNA methylation
7
3D chromatin structure
Date released
39
February, 2023
33
April, 2018
33
July, 2018
26
September, 2018
16
September, 2020
5
December, 2019
5
July, 2019
3
August, 2018
2
May, 2021
2
October, 2018
2
October, 2019
1
June, 2018
Available data
147
fastq
114
tsv
112
bam
112
bigWig
Organism
167
Homo sapiens
Biosample type
163
primary cell
cell line
2
in vitro differentiated cells
2
tissue
Organ
481
connective tissue
446
pancreas
401
adipose tissue
179
liver
167
epithelium
121
kidney
114
heart
62
bone element
24
brain
19
eye
15
blood vessel
15
vasculature
9
lung
9
musculature of body
7
limb
6
artery
6
embryo
5
nerve
4
skeleton
1
pericardium
1
spinal cord
Project
114
AMP
53
HPAP
Genome assembly (visualization)
112
GRCh38
112
hg19
Lab
114
AMP-T2D consortium
53
Klaus Kaestner, Upenn
Audit category:
2
inconsistent ontology term
biosample_type!
cell line
BIOSAMPLE
ASSAY
167 results
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total RNA-seq
single cell RNA-seq
primary cell
pancreatic alpha cell
52
12
pancreatic beta cell
21
12
pancreatic acinar cell
4
12
pancreatic ductal cell
4
10
pancreatic delta cell
11
+ See 11 more…
in vitro differentiated cells
endothelial cell
1
intermediate endothelial cell
1
tissue
pigmented layer of retina
2
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