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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
ChIP-seq
22
ATAC-seq
7
DNase-seq
2
FAIRE-seq
Assay category
53
DNA binding
31
DNA accessibility
Target of assay
43
histone
43
histone modification
27
broad histone mark
16
narrow histone mark
10
transcription factor
6
RNA binding protein
Date released
40
October, 2018
17
August, 2017
14
September, 2018
5
September, 2017
4
June, 2019
3
November, 2018
1
May, 2019
Available data
626
bam
567
bigWig
471
fastq
383
tsv
193
bed narrowPeak
84
bigBed narrowPeak
80
zippedFastqFolder
27
bed bed3+
20
bed broadPeak
19
tagAlign
6
bed bedMethyl
6
bedpe bed3+
6
bigBed bedMethyl
6
bigBed broadPeak
6
hic
6
txt
3
cool
1
bedpe
Organism
78
Homo sapiens
Biosample type
62
tissue
22
primary cell
cell line
Organ
127
brain
103
kidney
94
heart
84
limb
84
pancreas
83
vasculature
79
blood vessel
75
epithelium
65
liver
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
84
AMP
Genome assembly (visualization)
82
GRCh38
82
hg19
Lab
84
AMP-T2D consortium
Audit category:
5
inconsistent control read length
1
inconsistent assembly
biosample_type!
cell line
BIOSAMPLE
ASSAY
84 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
body of pancreas
26
4
pancreas
13
2
1
endocrine pancreas
14
islet of Langerhans
1
1
primary cell
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
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