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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ChIP-seq
Assay category
28
DNA binding
Target of assay
20
histone
20
histone modification
11
narrow histone mark
10
transcription factor
9
broad histone mark
chromatin remodeller
Date released
14
August, 2017
11
December, 2017
2
February, 2018
1
October, 2018
Available data
28
bam
28
bed narrowPeak
28
bigWig
28
fastq
10
bed bed3+
7
bigBed narrowPeak
Organism
28
Homo sapiens
Biosample type
cell line
15
in vitro differentiated cells
6
tissue
5
primary cell
2
stem cell
Organ
9
pancreas
5
epithelium
4
connective tissue
3
embryo
1
liver
Project
28
AMP
Genome assembly (visualization)
28
GRCh38
28
hg19
Lab
28
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
28
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
biosample_type!
cell line
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
28 results
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ChIP-seq
in vitro differentiated cells
adipocyte
4
definitive endodermal cell
4
Posterior foregut
2
pancreatic endoderm
2
primitive gut cell
2
+ See 1 more…
tissue
pancreas
4
body of pancreas
1
liver
1
primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
skeletal muscle myoblast
1
stem cell
hESC
2
See all biosamples
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