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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ChIP-seq
Assay category
25
DNA binding
Target of assay
18
histone
18
histone modification
10
narrow histone mark
9
transcription factor
8
broad histone mark
chromatin remodeller
Date released
14
August, 2017
8
December, 2017
2
February, 2018
1
October, 2018
Available data
25
bam
25
bed narrowPeak
25
bigWig
25
fastq
9
bed bed3+
7
bigBed narrowPeak
Organism
25
Homo sapiens
Biosample type
cell line
12
in vitro differentiated cells
6
tissue
5
primary cell
2
stem cell
Organ
9
pancreas
5
epithelium
4
connective tissue
embryo
1
liver
Project
25
AMP
Genome assembly (visualization)
25
GRCh38
25
hg19
Lab
25
AMP-T2D consortium
Audit category:
25
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
biosample_type!
cell line
target.investigated_as!
chromatin remodeller
organ_slims!
embryo
BIOSAMPLE
ASSAY
25 results
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ChIP-seq
in vitro differentiated cells
adipocyte
4
definitive endodermal cell
4
Posterior foregut
2
primitive gut cell
2
tissue
pancreas
4
body of pancreas
1
liver
1
primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
skeletal muscle myoblast
1
stem cell
hESC
2
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