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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
single cell RNA-seq
1
FAIRE-seq
Assay category
8
Transcription
1
DNA accessibility
Date released
6
February, 2021
1
November, 2018
1
October, 2019
1
September, 2018
Available data
2804
bam
2641
bigWig
1481
tsv
1407
bed narrowPeak
925
fastq
683
bigBed narrowPeak
378
tagAlign
270
bed bed3+
262
bed broadPeak
225
bigBed broadPeak
160
txt
153
zippedFastqFolder
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
21
bedpe bed3+
21
hic
11
bed bed3
8
csv
7
bed bedgraph
4
hdf5
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
tar
Organism
9
Homo sapiens
Biosample type
6
tissue
cell line
3
primary cell
Organ
5
kidney
1
blood vessel
1
epithelium
1
liver
1
vasculature
1
vein
Project
9
AMP
Genome assembly (visualization)
1
hg19
Lab
9
AMP-T2D consortium
Audit category:
5
audit script error
biosample_type!
cell line
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
9 results
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single cell RNA-seq
FAIRE-seq
tissue
kidney
5
liver
1
primary cell
pancreatic cell
2
endothelial cell of umbilical vein
1
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