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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
103
total RNA-seq
18
snATAC-seq
17
pCHi-C
11
ATAC-seq
Assay category
103
Transcription
29
DNA accessibility
Target of assay
histone
86
histone modification
44
broad histone mark
42
narrow histone mark
Date released
68
May, 2021
45
May, 2020
18
February, 2023
16
January, 2021
2
March, 2020
Available data
96
bam
96
bigWig
96
tsv
Organism
149
Homo sapiens
Biosample type
120
primary cell
29
tissue
cell line
Organ
28
pancreas
8
blood
8
bodily fluid
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
2744
AMP
324
HPAP
149
T1D
47
KPMP
19
LungMap
2
community
1
ITG
Genome assembly (visualization)
96
GRCh38
96
hg19
Lab
147
Kyle Gaulton, UCSD
2
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
biosample_type!
cell line
target.investigated_as!
histone
BIOSAMPLE
ASSAY
149 results
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total RNA-seq
snATAC-seq
pCHi-C
ATAC-seq
primary cell
monocyte
53
1
peripheral blood mononuclear cell
8
B cell
2
1
CD8-positive, alpha-beta T cell
2
1
naive B cel
2
1
+ See 31 more…
tissue
islet of Langerhans
7
6
11
pancreas
4
thymus
1
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