Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
163
ChIP-seq
Assay category
163
DNA binding
Target of assay
335
histone
335
histone modification
171
broad histone mark
163
narrow histone mark
73
control
54
transcription factor
16
RNA binding protein
3
chromatin remodeller
Date released
63
May, 2021
33
August, 2017
15
September, 2018
14
December, 2017
11
June, 2019
9
August, 2021
9
October, 2019
8
February, 2018
1
May, 2019
Available data
153
bigWig
145
bam
145
bed narrowPeak
74
fastq
59
tagAlign
31
bigBed narrowPeak
bed broadPeak
8
bigBed broadPeak
7
bed bed3+
Organism
163
Homo sapiens
Biosample type
tissue
107
primary cell
55
in vitro differentiated cells
cell line
1
stem cell
Organ
41
epithelium
32
pancreas
20
connective tissue
8
embryo
7
liver
6
blood vessel
6
vasculature
6
vein
5
kidney
4
musculature of body
2
heart
1
eye
Project
123
AMP
40
T1D
Genome assembly (visualization)
145
hg19
135
GRCh38
Lab
103
AMP-T2D consortium
60
Kyle Gaulton, UCSD
Audit category:
11
inconsistent ontology term
Audit category:
24
missing controlled_by
Audit category:
8
inconsistent control read length
1
inconsistent assembly
1
inconsistent control run_type
biosample_type!
cell line
tissue
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
163 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
primary cell
monocyte
41
pancreatic endocrine cell
12
CD8-positive, alpha-beta T cell
10
pancreatic ductal cell
7
endothelial cell of umbilical vein
6
+ See 14 more…
in vitro differentiated cells
adipocyte
16
embryonic stem cell
11
neural progenitor cell
7
pancreatic endoderm
6
hepatocyte
5
+ See 7 more…
stem cell
hESC
1
See all biosamples
Download