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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
ChIP-seq
Assay category
36
DNA binding
Target of assay
67
histone
67
histone modification
36
narrow histone mark
31
broad histone mark
control
6
transcription factor
5
RNA binding protein
Date released
11
September, 2018
9
October, 2019
8
August, 2017
December, 2017
2
August, 2021
2
June, 2019
2
November, 2017
1
May, 2019
1
May, 2021
Available data
36
bam
35
bed narrowPeak
35
bigWig
21
fastq
10
bigBed narrowPeak
3
tagAlign
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
36
Homo sapiens
Biosample type
35
primary cell
cell line
1
in vitro differentiated cells
Organ
117
brain
64
pancreas
44
liver
40
heart
36
epithelium
33
connective tissue
26
vasculature
25
blood vessel
15
kidney
15
limb
13
musculature of body
12
adipose tissue
8
nerve
6
artery
6
vein
4
gonad
4
ovary
3
embryo
3
eye
2
spleen
1
lymph node
1
pituitary gland
Project
36
AMP
Genome assembly (visualization)
35
GRCh38
35
hg19
Lab
36
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
11
missing controlled_by
Audit category:
4
inconsistent control read length
biosample_type!
cell line
target.investigated_as!
control
month_released!
December, 2017
BIOSAMPLE
ASSAY
36 results
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ChIP-seq
primary cell
pancreatic ductal cell
7
endothelial cell of umbilical vein
6
epithelial cell of proximal tubule
4
pancreatic acinar cell
4
pancreatic alpha cell
4
+ See 6 more…
in vitro differentiated cells
pancreatic PP cell
1
See all biosamples
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