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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
352
ChIP-seq
Assay category
352
DNA binding
Target of assay
628
histone modification
627
histone
324
narrow histone mark
303
broad histone mark
187
control
94
transcription factor
28
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
129
October, 2019
52
August, 2017
37
May, 2019
28
November, 2017
27
April, 2019
27
May, 2020
22
October, 2018
20
May, 2024
4
December, 2017
2
January, 2019
2
March, 2020
2
October, 2017
Available data
295
bigWig
292
bed narrowPeak
266
bam
128
bigBed narrowPeak
110
tagAlign
43
fastq
15
bed broadPeak
8
bed bed3+
1
tagAlign bed3+
Organism
350
Homo sapiens
Biosample type
352
tissue
125
primary cell
cell line
66
in vitro differentiated cells
1
stem cell
Organ
114
brain
48
heart
46
liver
40
pancreas
21
blood vessel
21
vasculature
18
connective tissue
17
adipose tissue
15
limb
11
kidney
9
musculature of body
8
nerve
7
artery
4
gonad
4
ovary
2
eye
2
spleen
1
lymph node
1
pituitary gland
Project
350
AMP
2
T1D
Genome assembly (visualization)
278
GRCh38
261
hg19
Lab
332
AMP-T2D consortium
20
Patrick T. Ellinor, Broad
Audit category:
2
inconsistent ontology term
Audit category:
5
missing controlled_by
Audit category:
3
inconsistent control read length
biosample_type!
cell line
BIOSAMPLE
ASSAY
352 results
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Clear Filters
ChIP-seq
tissue
liver
43
islet of Langerhans
39
left cardiac atrium
20
heart left ventricle
12
body of pancreas
11
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