Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
279
ChIP-seq
247
total RNA-seq
200
ATAC-seq
187
single cell RNA-seq
56
snATAC-seq
47
WGBS
31
DNase-seq
17
pCHi-C
10
Hi-C
10
RRBS
2
small RNA-seq
1
DNAme array
1
FAIRE-seq
Assay category
56
DNA accessibility
2
Transcription
Date released
27
February, 2021
21
May, 2022
8
January, 2021
2
July, 2019
Available data
27
fastq
21
zippedFastqFolder
2
bam
2
bigWig
2
tsv
Organism
58
Homo sapiens
Biosample type
58
primary cell
44
tissue
Organ
8
blood
8
bodily fluid
1
adipose tissue
1
connective tissue
1
musculature of body
Project
48
HPAP
8
T1D
2
AMP
Genome assembly (visualization)
2
GRCh38
2
hg19
Lab
48
Klaus Kaestner, Upenn
8
Kyle Gaulton, UCSD
2
AMP-T2D consortium
Audit category:
27
audit script error
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
58 results
search-icon
table-tab-icon
Clear Filters
snATAC-seq
small RNA-seq
primary cell
Langerhans cell
48
peripheral blood mononuclear cell
8
mesenchymal stem cell of adipose
1
skeletal muscle satellite cell
1
Download