Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
52
ChIP-seq
41
total RNA-seq
32
ATAC-seq
7
single cell RNA-seq
6
MeRIP-seq
6
pCHi-C
4
DNase-seq
2
Capture-C
2
RRBS
1
Hi-C
1
STARR-seq
Assay category
41
Transcription
Date released
26
February, 2021
4
May, 2020
4
May, 2021
3
October, 2019
2
March, 2020
1
February, 2020
1
November, 2019
Available data
41
tsv
40
bam
40
bigWig
Organism
41
Homo sapiens
Biosample type
in vitro differentiated cells
36
cell line
4
primary cell
1
tissue
Organ
33
epithelium
33
pancreas
3
kidney
1
brain
Project
35
AMP
6
T1D
Genome assembly (visualization)
40
GRCh38
40
hg19
Lab
37
AMP-T2D consortium
4
Kyle Gaulton, UCSD
Audit category:
41
inconsistent ontology term
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
41 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
cell line
EndoC_BH1
33
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
primary cell
central memory CD8-positive, alpha-beta T cell
2
naive B cel
2
tissue
cerebellum (Hemisphere)
1
Download