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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ATAC-seq
20
total RNA-seq
11
ChIP-seq
2
Hi-C
Assay category
21
DNA accessibility
20
Transcription
11
DNA binding
2
3D chromatin structure
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
548
February, 2021
281
November, 2017
260
May, 2020
227
August, 2017
227
May, 2021
209
October, 2019
187
June, 2019
164
July, 2018
97
May, 2019
91
July, 2019
72
September, 2018
71
November, 2018
65
April, 2019
54
November, 2019
49
April, 2018
47
October, 2018
39
December, 2017
39
May, 2022
33
February, 2023
30
December, 2018
27
August, 2021
26
January, 2019
26
March, 2020
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
52
bam
32
bed narrowPeak
31
bigWig
20
tsv
2
bedpe bed3+
2
hic
Organism
54
Homo sapiens
Biosample type
40
tissue
14
cell line
in vitro differentiated cells
Organ
53
pancreas
14
epithelium
1
adipose tissue
1
connective tissue
Project
54
AMP
Genome assembly (visualization)
54
hg19
52
GRCh38
Lab
54
AMP-T2D consortium
Audit category:
15
inconsistent ontology term
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
54 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
19
19
1
adipose tissue(adipose white tissue)
1
cell line
EndoC_BH1
1
1
11
1
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