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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
ChIP-seq
4
ATAC-seq
4
DNase-seq
Assay category
42
DNA binding
8
DNA accessibility
Target of assay
31
histone
31
histone modification
17
narrow histone mark
14
broad histone mark
11
transcription factor
7
recombinant protein
4
RNA binding protein
Date released
22
June, 2019
13
November, 2019
11
October, 2019
2
May, 2019
1
March, 2020
1
May, 2021
Available data
111
bam
99
bigWig
84
txt
60
tsv
50
bed narrowPeak
24
bigBed narrowPeak
7
fastq
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bedpe bed3+
1
hic
Organism
50
Homo sapiens
Biosample type
25
primary cell
21
cell line
in vitro differentiated cells
4
tissue
Organ
20
epithelium
14
pancreas
12
kidney
11
connective tissue
8
musculature of body
4
heart
2
brain
1
adipose tissue
1
limb
1
liver
1
vasculature
Project
48
AMP
2
T1D
Genome assembly (visualization)
50
GRCh38
50
hg19
Lab
50
AMP-T2D consortium
Audit category:
50
inconsistent ontology term
28
inconsistent control
1
inconsistent replicate
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
50 results
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ChIP-seq
ATAC-seq
DNase-seq
primary cell
skeletal muscle satellite cell
7
mesenchymal stem cell
6
cardiac fibroblast
3
1
epithelial cell of proximal tubule
2
1
kidney epithelial cell
2
+ See 3 more…
cell line
EndoC_BH1
13
1
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
RCC 7860 vector
2
tissue
adipose tissue(adipose white tissue)
1
brodmann area 43
1
insular gyrus
1
muscle of leg
1
See all biosamples
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