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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ATAC-seq
49
total RNA-seq
8
single cell RNA-seq
6
snATAC-seq
2
Hi-C
1
RNA microarray
Assay category
70
DNA accessibility
57
Transcription
2
3D chromatin structure
Date released
234
October, 2019
195
August, 2017
163
June, 2019
130
August, 2021
115
May, 2019
93
February, 2021
91
February, 2023
82
November, 2017
80
April, 2019
74
October, 2018
66
May, 2022
50
May, 2020
48
December, 2017
47
September, 2023
40
May, 2024
30
July, 2019
26
November, 2018
23
October, 2017
21
November, 2019
19
April, 2020
15
May, 2023
12
March, 2020
8
January, 2021
7
December, 2018
7
January, 2019
6
September, 2017
5
March, 2019
4
July, 2018
4
November, 2020
2
January, 2018
2
May, 2021
1
August, 2022
1
December, 2019
Available data
tsv
64
bed narrowPeak
64
xls
57
txt
1
bedpe bed3+
1
hic
Organism
129
Homo sapiens
Biosample type
130
tissue
in vitro differentiated cells
27
cell line
4
primary cell
Organ
128
kidney
1
adipose tissue
1
connective tissue
1
pancreas
Project
130
AMP
Genome assembly (visualization)
64
GRCh38
1
hg19
Lab
128
Katalin Susztak, Upenn
1
AMP-T2D consortium
1
Bing Ren, UCSD
biosample_type!
in vitro differentiated cells
files.file_type!
tsv
BIOSAMPLE
ASSAY
130 results
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Clear Filters
ATAC-seq
total RNA-seq
single cell RNA-seq
snATAC-seq
Hi-C
RNA microarray
tissue
kidney
64
49
8
6
1
islet of Langerhans
1
subcutaneous adipose tissue
1
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