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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
1
pCHi-C
Assay category
13
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
7
control
6
transcription factor
3
other context
3
other post-translational modification
Date released
9
November, 2018
7
December, 2018
January, 2019
1
March, 2020
1
October, 2017
Available data
17
bam
17
fastq
10
bigWig
8
bed narrowPeak
7
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
18
Homo sapiens
Biosample type
18
tissue
Organ
937
pancreas
771
liver
587
connective tissue
500
epithelium
490
adipose tissue
392
heart
292
kidney
286
brain
236
vasculature
230
blood vessel
141
artery
122
limb
95
musculature of body
71
bone element
61
eye
51
blood
51
bodily fluid
43
nerve
22
vein
20
lung
18
spleen
18
ureter
12
skeleton
8
embryo
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
18
AMP
Genome assembly (visualization)
10
GRCh38
8
hg19
Lab
18
AMP-T2D consortium
biosample_type!
in vitro differentiated cells
files.file_type!
txt
month_released!
January, 2019
BIOSAMPLE
ASSAY
18 results
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ChIP-seq
WGBS
ATAC-seq
DNase-seq
pCHi-C
tissue
spleen
13
2
1
1
1
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