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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
85
ChIP-seq
Assay category
85
DNA binding
Target of assay
389
transcription factor
372
histone
372
histone modification
231
broad histone mark
141
narrow histone mark
85
RNA binding protein
81
recombinant protein
27
chromatin remodeller
5
other context
5
other post-translational modification
Date released
35
November, 2017
21
November, 2018
11
October, 2018
January, 2019
5
May, 2019
4
June, 2019
3
April, 2019
2
August, 2017
2
December, 2017
2
December, 2018
Available data
94
bigWig
93
bed narrowPeak
91
bam
85
bigBed narrowPeak
77
fastq
9
bed broadPeak
9
bigBed broadPeak
2
bed bed3+
1
tar
Organism
85
Homo sapiens
Biosample type
55
cell line
20
tissue
10
primary cell
in vitro differentiated cells
Organ
53
liver
6
connective tissue
6
heart
6
pancreas
5
adipose tissue
5
epithelium
5
vasculature
4
blood
4
blood vessel
4
bodily fluid
3
brain
2
kidney
1
artery
1
eye
Project
85
AMP
Genome assembly (visualization)
84
hg19
80
GRCh38
Lab
85
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
Audit category:
2
missing controlled_by
Audit category:
6
inconsistent control read length
3
inconsistent control run_type
biosample_type!
in vitro differentiated cells
month_released!
January, 2019
BIOSAMPLE
ASSAY
85 results
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Clear Filters
ChIP-seq
cell line
HepG2
51
GM12878
4
tissue
body of pancreas
5
heart left ventricle
3
omental fat pad
3
subcutaneous adipose tissue
2
ascending aorta
1
+ See 6 more…
primary cell
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
cardiac fibroblast
1
cardiac muscle cell
1
+ See 4 more…
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